Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Usp4P35123 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp4P35123 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp4P35123 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Usp4P35123 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp4P35123 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp4P35123 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp4P35123 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Mir669l-201ENSMUST00000103771 98 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm7494-201ENSMUST00000121248 441 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm12778-201ENSMUST00000122341 333 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm15242-201ENSMUST00000122459 283 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Gm24002-201ENSMUST00000158456 104 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm24176-201ENSMUST00000158928 121 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm16026-202ENSMUST00000159695 772 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Mir6244-201ENSMUST00000184156 117 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm8860-201ENSMUST00000193160 445 ntBASIC6.72□□□□□ -1.33
Usp4P35123 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Gm7804-202ENSMUST00000194187 854 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm43141-201ENSMUST00000199695 274 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm44353-201ENSMUST00000200618 138 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm42799-201ENSMUST00000201331 328 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm43922-201ENSMUST00000205071 328 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm46103-201ENSMUST00000217614 341 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm18892-201ENSMUST00000217628 881 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Gm32300-201ENSMUST00000221735 515 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Gm29486-201ENSMUST00000088648 372 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp4P35123 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Usp4P35123 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp4P35123 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Usp4P35123 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.72□□□□□ -1.33
Usp4P35123 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.72□□□□□ -1.33
Usp4P35123 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp4P35123 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Usp4P35123 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp4P35123 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Usp4P35123 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp4P35123 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm23748-201ENSMUST00000104227 131 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm14356-201ENSMUST00000118322 869 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm4992-201ENSMUST00000120256 768 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm5166-201ENSMUST00000121332 573 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm13669-201ENSMUST00000122366 457 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms