Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm12807-201ENSMUST00000121546 962 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm11910-201ENSMUST00000121624 432 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.14□□□□□ -1.43
RxraP28700 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Gm26557-201ENSMUST00000180756 493 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Gm21742-201ENSMUST00000189352 548 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm38237-201ENSMUST00000193366 376 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Gm20239-201ENSMUST00000196610 982 ntBASIC6.14□□□□□ -1.43
RxraP28700 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm43295-201ENSMUST00000201439 412 ntBASIC6.14□□□□□ -1.43
RxraP28700 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.14□□□□□ -1.43
RxraP28700 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC6.14□□□□□ -1.43
RxraP28700 Gm44865-201ENSMUST00000207240 531 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm4574-201ENSMUST00000207804 542 ntBASIC6.14□□□□□ -1.43
RxraP28700 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.14□□□□□ -1.43
RxraP28700 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.14□□□□□ -1.43
RxraP28700 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.14□□□□□ -1.43
RxraP28700 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.14□□□□□ -1.43
RxraP28700 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.14□□□□□ -1.43
RxraP28700 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 Gm26442-201ENSMUST00000082588 153 ntBASIC6.14□□□□□ -1.43
RxraP28700 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.14□□□□□ -1.43
RxraP28700 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RxraP28700 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RxraP28700 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.13□□□□□ -1.43
RxraP28700 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RxraP28700 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm6977-201ENSMUST00000121568 512 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.13□□□□□ -1.43
RxraP28700 Gm23553-201ENSMUST00000157817 295 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm26371-201ENSMUST00000157829 104 ntBASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.13□□□□□ -1.43
RxraP28700 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Gm5947-201ENSMUST00000179156 714 ntBASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RxraP28700 Gm5645-201ENSMUST00000179597 714 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm27037-201ENSMUST00000182270 960 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm18799-201ENSMUST00000189104 913 ntBASIC6.13□□□□□ -1.43
RxraP28700 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm18348-201ENSMUST00000191227 820 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm43849-201ENSMUST00000201086 215 ntBASIC6.13□□□□□ -1.43
RxraP28700 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm5306-201ENSMUST00000203325 757 ntBASIC6.13□□□□□ -1.43
RxraP28700 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.13□□□□□ -1.43
RxraP28700 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RxraP28700 Gm6850-201ENSMUST00000210031 530 ntBASIC6.13□□□□□ -1.43
RxraP28700 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.13□□□□□ -1.43
RxraP28700 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.13□□□□□ -1.43
RxraP28700 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.13□□□□□ -1.43
RxraP28700 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.13□□□□□ -1.43
RxraP28700 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.13□□□□□ -1.43
RxraP28700 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm43216-201ENSMUST00000196295 1333 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.13□□□□□ -1.43
RxraP28700 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RxraP28700 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RxraP28700 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.13□□□□□ -1.43
RxraP28700 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.12□□□□□ -1.43
RxraP28700 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.12□□□□□ -1.43
RxraP28700 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RxraP28700 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RxraP28700 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RxraP28700 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RxraP28700 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.12□□□□□ -1.43
RxraP28700 Gm12439-201ENSMUST00000117162 365 ntBASIC6.12□□□□□ -1.43
RxraP28700 Gm14382-201ENSMUST00000117374 437 ntBASIC6.12□□□□□ -1.43
RxraP28700 Gm13679-201ENSMUST00000118678 484 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms