Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm37593-201ENSMUST00000191669 3254 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Col2a1P28481 Mir193b-201ENSMUST00000103784 79 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Gm24789-201ENSMUST00000104282 131 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.62□□□□□ -1.35
Col2a1P28481 Mir3080-201ENSMUST00000175010 79 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Gm44683-201ENSMUST00000209088 484 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.62□□□□□ -1.35
Col2a1P28481 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 AV026068-231ENSMUST00000225862 482 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col2a1P28481 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
Col2a1P28481 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.62□□□□□ -1.35
Col2a1P28481 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Col2a1P28481 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Col2a1P28481 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.62□□□□□ -1.35
Col2a1P28481 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col2a1P28481 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm13887-201ENSMUST00000119009 344 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Mir1945-201ENSMUST00000157919 78 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm20549-201ENSMUST00000174804 429 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm9332-201ENSMUST00000198431 730 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm44132-201ENSMUST00000205142 151 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm45082-201ENSMUST00000206082 601 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm3257-201ENSMUST00000207217 675 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm18587-201ENSMUST00000213736 841 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Gm25682-201ENSMUST00000083942 164 ntBASIC6.61□□□□□ -1.35
Col2a1P28481 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.61□□□□□ -1.35
Col2a1P28481 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Col2a1P28481 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Col2a1P28481 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col2a1P28481 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col2a1P28481 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms