Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm10095-201ENSMUST00000222765 483 ntBASIC5.22□□□□□ -1.57
P20040 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.22□□□□□ -1.57
P20040 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
P20040 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.22□□□□□ -1.57
P20040 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.22□□□□□ -1.57
P20040 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
P20040 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.22□□□□□ -1.57
P20040 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.22□□□□□ -1.57
P20040 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.22□□□□□ -1.57
P20040 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.22□□□□□ -1.57
P20040 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.22□□□□□ -1.57
P20040 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.22□□□□□ -1.57
P20040 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.22□□□□□ -1.57
P20040 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.22□□□□□ -1.57
P20040 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.21□□□□□ -1.57
P20040 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.21□□□□□ -1.57
P20040 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
P20040 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.57
P20040 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
P20040 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.21□□□□□ -1.58
P20040 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.21□□□□□ -1.58
P20040 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
P20040 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.21□□□□□ -1.58
P20040 Gm11902-201ENSMUST00000118849 270 ntBASIC5.21□□□□□ -1.58
P20040 Gm15971-201ENSMUST00000119372 211 ntBASIC5.21□□□□□ -1.58
P20040 Gm14331-201ENSMUST00000120396 409 ntBASIC5.21□□□□□ -1.58
P20040 Gm15696-201ENSMUST00000121730 445 ntBASIC5.21□□□□□ -1.58
P20040 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
P20040 Gm22636-201ENSMUST00000158142 275 ntBASIC5.21□□□□□ -1.58
P20040 Gm8185-201ENSMUST00000160999 669 ntBASIC5.21□□□□□ -1.58
P20040 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
P20040 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
P20040 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
P20040 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Gm37265-201ENSMUST00000191698 885 ntBASIC5.21□□□□□ -1.58
P20040 Gm37966-201ENSMUST00000193122 326 ntBASIC5.21□□□□□ -1.58
P20040 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.21□□□□□ -1.58
P20040 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.21□□□□□ -1.58
P20040 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.21□□□□□ -1.58
P20040 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.21□□□□□ -1.58
P20040 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.21□□□□□ -1.58
P20040 Gm5306-201ENSMUST00000203325 757 ntBASIC5.21□□□□□ -1.58
P20040 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 Gm18255-201ENSMUST00000211316 765 ntBASIC5.21□□□□□ -1.58
P20040 Gm18789-201ENSMUST00000216115 550 ntBASIC5.21□□□□□ -1.58
P20040 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.21□□□□□ -1.58
P20040 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.21□□□□□ -1.58
P20040 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.21□□□□□ -1.58
P20040 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.21□□□□□ -1.58
P20040 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.21□□□□□ -1.58
P20040 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.21□□□□□ -1.58
P20040 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
P20040 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
P20040 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
P20040 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
P20040 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.21□□□□□ -1.58
P20040 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
P20040 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
P20040 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.2□□□□□ -1.58
P20040 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.2□□□□□ -1.58
P20040 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.2□□□□□ -1.58
P20040 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
P20040 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
P20040 Gm24434-201ENSMUST00000104081 132 ntBASIC5.2□□□□□ -1.58
P20040 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
P20040 Gm12643-201ENSMUST00000116078 374 ntBASIC5.2□□□□□ -1.58
P20040 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.2□□□□□ -1.58
P20040 Gm14098-201ENSMUST00000119295 623 ntBASIC5.2□□□□□ -1.58
P20040 Gm14294-201ENSMUST00000119749 751 ntBASIC5.2□□□□□ -1.58
P20040 Gm12890-201ENSMUST00000120885 373 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms