Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm6575-201ENSMUST00000222946 697 ntBASIC5.98□□□□□ -1.45
Lire1P11260 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Lire1P11260 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lire1P11260 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lire1P11260 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.98□□□□□ -1.45
Lire1P11260 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Lire1P11260 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lire1P11260 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lire1P11260 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lire1P11260 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm25574-201ENSMUST00000175245 249 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm6061-201ENSMUST00000175860 492 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Gm28094-201ENSMUST00000185262 390 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm35323-201ENSMUST00000191836 499 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm34768-201ENSMUST00000193884 565 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Gm43922-201ENSMUST00000205071 328 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Gm7252-201ENSMUST00000223284 456 ntBASIC5.97□□□□□ -1.45
Lire1P11260 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lire1P11260 Gm24032-201ENSMUST00000083932 159 ntBASIC5.97□□□□□ -1.45
Lire1P11260 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lire1P11260 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.97□□□□□ -1.45
Lire1P11260 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lire1P11260 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.96□□□□□ -1.45
Lire1P11260 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lire1P11260 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lire1P11260 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.96□□□□□ -1.45
Lire1P11260 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm24709-201ENSMUST00000104123 132 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm22374-201ENSMUST00000104583 132 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
Lire1P11260 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Gm14550-201ENSMUST00000117918 407 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.96□□□□□ -1.46
Lire1P11260 Gm23674-201ENSMUST00000157473 131 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm24435-201ENSMUST00000157886 110 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm23897-201ENSMUST00000158110 158 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm24363-201ENSMUST00000158440 311 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm24176-201ENSMUST00000158928 121 ntBASIC5.96□□□□□ -1.46
Lire1P11260 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.96□□□□□ -1.46
Lire1P11260 Gm23810-201ENSMUST00000175150 74 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm25244-201ENSMUST00000178089 132 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm29385-201ENSMUST00000186831 363 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm21301-201ENSMUST00000189476 699 ntBASIC5.96□□□□□ -1.46
Lire1P11260 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.96□□□□□ -1.46
Lire1P11260 Gm44225-201ENSMUST00000203582 186 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm18255-201ENSMUST00000211316 765 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.96□□□□□ -1.46
Lire1P11260 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Lire1P11260 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Lire1P11260 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms