Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.86□□□□□ -1.31
Col1a1P11087 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm12287-201ENSMUST00000119770 707 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.85□□□□□ -1.31
Col1a1P11087 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm20545-201ENSMUST00000174739 210 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm5334-201ENSMUST00000187472 720 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm17984-201ENSMUST00000205286 859 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm4548-201ENSMUST00000208487 509 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm18904-201ENSMUST00000218756 329 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.85□□□□□ -1.31
Col1a1P11087 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Col1a1P11087 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Col1a1P11087 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Col1a1P11087 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm13338-201ENSMUST00000120235 361 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm11825-201ENSMUST00000120710 736 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm23537-201ENSMUST00000157536 330 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm26312-201ENSMUST00000157769 165 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm26486-201ENSMUST00000158021 110 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm4831-201ENSMUST00000174626 594 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28604-201ENSMUST00000186629 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28566-201ENSMUST00000186714 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28194-201ENSMUST00000187412 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28886-202ENSMUST00000187889 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28554-202ENSMUST00000189175 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29213-202ENSMUST00000189703 484 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms