Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm8545-201ENSMUST00000120692 801 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm15335-201ENSMUST00000122442 411 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm14349-201ENSMUST00000137155 902 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.04□□□□□ -1.44
Hoxa9P09631 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm23954-201ENSMUST00000157213 353 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm9671-201ENSMUST00000171502 547 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm20480-201ENSMUST00000173953 250 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm27409-201ENSMUST00000184727 80 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm8367-201ENSMUST00000186145 887 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm43222-201ENSMUST00000199013 603 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm43456-201ENSMUST00000202519 457 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm6070-201ENSMUST00000207275 419 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Mir143-201ENSMUST00000083511 63 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxa9P09631 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.04□□□□□ -1.44
Hoxa9P09631 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxa9P09631 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm25564-201ENSMUST00000104604 132 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm12482-201ENSMUST00000120435 630 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm14563-201ENSMUST00000120571 354 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm25152-201ENSMUST00000157117 114 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm21399-201ENSMUST00000180210 597 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm16531-201ENSMUST00000180658 967 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm37838-201ENSMUST00000194464 312 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.03□□□□□ -1.44
Hoxa9P09631 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.03□□□□□ -1.44
Hoxa9P09631 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxa9P09631 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.03□□□□□ -1.44
Hoxa9P09631 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxa9P09631 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxa9P09631 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxa9P09631 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.02□□□□□ -1.45
Hoxa9P09631 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxa9P09631 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.02□□□□□ -1.45
Hoxa9P09631 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxa9P09631 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.02□□□□□ -1.45
Hoxa9P09631 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxa9P09631 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxa9P09631 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Hoxa9P09631 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms