Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37526-201ENSMUST00000194640 619 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm25617-202ENSMUST00000198387 132 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Igkv4-77-201ENSMUST00000199410 352 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm7554-201ENSMUST00000202282 574 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm44134-202ENSMUST00000204777 545 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm45082-201ENSMUST00000206082 601 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Hmgb3O54879 AC154361.1-201ENSMUST00000225694 745 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm9985-201ENSMUST00000044101 510 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm8412-201ENSMUST00000077493 440 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm23624-201ENSMUST00000082463 321 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm24200-201ENSMUST00000082955 157 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 Gm37370-201ENSMUST00000191996 1410 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmgb3O54879 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.69□□□□□ -1.66
Hmgb3O54879 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Hmgb3O54879 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmgb3O54879 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm10568-201ENSMUST00000193244 1634 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm19125-201ENSMUST00000188408 1383 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm44750-201ENSMUST00000206185 2223 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm11799-201ENSMUST00000116110 460 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm15400-201ENSMUST00000118944 601 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm11447-201ENSMUST00000118983 858 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm14732-201ENSMUST00000121372 545 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm25281-201ENSMUST00000157270 104 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm22160-201ENSMUST00000158405 328 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Scarna10-201ENSMUST00000158992 325 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm3344-201ENSMUST00000169610 603 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm20454-201ENSMUST00000172713 221 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Mir5100-201ENSMUST00000174993 64 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm1972-201ENSMUST00000181606 964 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm26970-201ENSMUST00000182990 964 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm10136-201ENSMUST00000183196 435 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm27998-201ENSMUST00000184902 361 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm37439-201ENSMUST00000193150 856 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm42696-201ENSMUST00000199859 1142 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm20136-201ENSMUST00000207501 891 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm18205-201ENSMUST00000209215 841 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 AC154849.2-201ENSMUST00000223781 974 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 AC165092.4-201ENSMUST00000225025 679 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 AC154323.2-201ENSMUST00000226557 1151 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Hmgb3O54879 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Gm44255-201ENSMUST00000203456 2053 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.68□□□□□ -1.66
Hmgb3O54879 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Hmgb3O54879 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms