Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm9697-201ENSMUST00000147052 997 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm8550-201ENSMUST00000161621 653 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm18128-201ENSMUST00000172625 511 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm8245-201ENSMUST00000182434 987 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm27507-201ENSMUST00000184199 93 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm27942-201ENSMUST00000184669 101 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm18501-201ENSMUST00000185363 664 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm30517-201ENSMUST00000197350 772 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm43157-201ENSMUST00000198223 412 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm44227-201ENSMUST00000203576 241 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm17984-201ENSMUST00000205286 859 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm44722-201ENSMUST00000206473 436 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm46424-201ENSMUST00000221567 168 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm18618-201ENSMUST00000222211 473 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm5341-201ENSMUST00000058881 489 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm24917-201ENSMUST00000083935 104 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Mir503-201ENSMUST00000102168 71 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm22707-201ENSMUST00000103834 110 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm9836-201ENSMUST00000117132 216 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm14279-201ENSMUST00000117142 332 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm12306-201ENSMUST00000117256 171 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm10243-201ENSMUST00000117571 333 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm14607-201ENSMUST00000119119 491 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm11708-201ENSMUST00000119530 832 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms