Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm23481-201ENSMUST00000104173 131 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm6786-201ENSMUST00000203165 1915 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm23553-201ENSMUST00000157817 295 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm22725-201ENSMUST00000158092 110 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm37495-201ENSMUST00000194590 264 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm32308-201ENSMUST00000203053 280 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm28428-201ENSMUST00000188886 697 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a3E9PWQ3 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm27568-201ENSMUST00000184220 99 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm44833-201ENSMUST00000208368 331 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm1866-201ENSMUST00000120701 477 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm27976-201ENSMUST00000183635 162 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm43309-201ENSMUST00000200837 458 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms