Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm44374-201ENSMUST00000199821 140 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm44053-201ENSMUST00000203364 929 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm18255-201ENSMUST00000211316 765 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm9292-201ENSMUST00000222008 710 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm18247-201ENSMUST00000222937 601 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Lima1Q9ERG0 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lima1Q9ERG0 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lima1Q9ERG0 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Lima1Q9ERG0 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Lima1Q9ERG0 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm22231-201ENSMUST00000101027 73 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm13311-201ENSMUST00000117863 379 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm15332-201ENSMUST00000118386 357 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm16074-201ENSMUST00000119524 444 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm12308-201ENSMUST00000120440 389 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Scarna10-201ENSMUST00000158992 325 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm18006-201ENSMUST00000177411 662 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm43233-201ENSMUST00000200491 616 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm18839-201ENSMUST00000204292 670 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lima1Q9ERG0 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm12643-201ENSMUST00000116078 374 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm11609-201ENSMUST00000121926 793 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm5125-201ENSMUST00000148614 624 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms