Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm14769-201ENSMUST00000118590 432 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm25865-201ENSMUST00000158247 104 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm4412-201ENSMUST00000186660 433 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm9038-201ENSMUST00000203400 604 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm3267-201ENSMUST00000118671 473 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm37341-201ENSMUST00000194680 371 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm2961-201ENSMUST00000211074 772 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm15096-201ENSMUST00000121918 878 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm3531-201ENSMUST00000162698 489 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm7128-201ENSMUST00000211639 533 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm6906-201ENSMUST00000218014 569 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm22899-201ENSMUST00000104540 131 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm44225-201ENSMUST00000203582 186 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh23Q99PF4 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms