Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.96□□□□□ -1.46
Msh4Q99MT2 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh4Q99MT2 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm15300-201ENSMUST00000122324 279 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm20620-201ENSMUST00000177528 168 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm28745-201ENSMUST00000190069 305 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm6074-201ENSMUST00000193340 451 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm3544-201ENSMUST00000196129 305 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm45247-201ENSMUST00000210757 309 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm7557-201ENSMUST00000221935 865 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 AC154184.2-201ENSMUST00000225335 349 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Mir3068-201ENSMUST00000083004 136 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.95□□□□□ -1.46
Msh4Q99MT2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Msh4Q99MT2 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.94□□□□□ -1.46
Msh4Q99MT2 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.94□□□□□ -1.46
Msh4Q99MT2 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Msh4Q99MT2 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.94□□□□□ -1.46
Msh4Q99MT2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms