Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm13770-201ENSMUST00000117149 305 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm11256-201ENSMUST00000118109 829 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm15765-201ENSMUST00000118407 910 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm12099-201ENSMUST00000118660 750 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm14930-201ENSMUST00000118864 652 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm6654-201ENSMUST00000118950 348 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm11472-201ENSMUST00000121305 556 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm12369-201ENSMUST00000121343 942 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm24382-201ENSMUST00000122698 107 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm20453-201ENSMUST00000173968 226 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm29489-201ENSMUST00000188934 324 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm43779-201ENSMUST00000196691 829 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm45405-201ENSMUST00000211544 609 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm23624-201ENSMUST00000082463 321 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdk5rap3Q99LM2 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm14610-201ENSMUST00000118358 966 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm9506-201ENSMUST00000118516 320 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm13998-201ENSMUST00000120952 335 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm7494-201ENSMUST00000121248 441 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm16298-201ENSMUST00000161107 420 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm21839-201ENSMUST00000179536 378 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm27004-201ENSMUST00000183300 727 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm29464-201ENSMUST00000187692 513 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm5066-201ENSMUST00000188479 822 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm37196-201ENSMUST00000194762 906 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm18427-201ENSMUST00000195422 515 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm31211-201ENSMUST00000199170 253 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm24200-201ENSMUST00000082955 157 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm24029-201ENSMUST00000083928 143 ntBASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdk5rap3Q99LM2 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms