Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm8995-202ENSMUST00000208417 3490 ntBASIC7.4□□□□□ -1.23
Clp1Q99LI9 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Clp1Q99LI9 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.4□□□□□ -1.23
Clp1Q99LI9 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Clp1Q99LI9 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Zfp640-202ENSMUST00000224116 1562 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm14893-201ENSMUST00000117904 282 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm12677-201ENSMUST00000118668 426 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm15618-201ENSMUST00000121610 452 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm25117-201ENSMUST00000157194 144 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm22518-201ENSMUST00000158267 68 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm25904-201ENSMUST00000158491 143 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm3140-201ENSMUST00000163523 481 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm17137-202ENSMUST00000165729 957 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm9671-201ENSMUST00000171502 547 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm27998-201ENSMUST00000184902 361 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm29470-201ENSMUST00000188007 696 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm28655-201ENSMUST00000191538 692 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm35323-201ENSMUST00000191836 499 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm17953-201ENSMUST00000192061 667 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm43096-201ENSMUST00000196173 421 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm43232-201ENSMUST00000201346 364 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm3257-201ENSMUST00000207217 675 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm17994-201ENSMUST00000209260 533 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC118733.1-201ENSMUST00000217387 1217 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm36262-201ENSMUST00000223274 499 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm6990-201ENSMUST00000086830 348 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 AC155298.3-201ENSMUST00000225307 3220 ntBASIC7.39□□□□□ -1.23
Clp1Q99LI9 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Clp1Q99LI9 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms