Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm23527-201ENSMUST00000104570 130 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm9506-201ENSMUST00000118516 320 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm15181-201ENSMUST00000120142 177 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm14054-201ENSMUST00000120744 704 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm12488-201ENSMUST00000122449 499 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm21399-201ENSMUST00000180210 597 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm37503-201ENSMUST00000192088 319 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm44382-201ENSMUST00000198683 122 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm9278-201ENSMUST00000205508 553 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm19212-201ENSMUST00000216642 862 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 AC155834.1-201ENSMUST00000220033 498 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 AC122397.3-201ENSMUST00000227097 527 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm29486-201ENSMUST00000088648 372 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm45201-201ENSMUST00000207187 2679 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.65□□□□□ -1.67
Nup35Q8R4R6 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Mir688-201ENSMUST00000102055 75 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Mir711-201ENSMUST00000102188 82 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm12077-201ENSMUST00000117049 364 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm12131-201ENSMUST00000117479 359 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm8430-201ENSMUST00000119780 471 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm12110-201ENSMUST00000121601 579 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm23888-201ENSMUST00000122690 253 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm25826-201ENSMUST00000157090 137 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm16125-201ENSMUST00000159003 339 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm26557-201ENSMUST00000180756 493 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm1972-201ENSMUST00000181606 964 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm28195-201ENSMUST00000186992 372 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm4322-201ENSMUST00000191094 336 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm18444-201ENSMUST00000191239 629 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm36932-201ENSMUST00000195226 929 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm7166-201ENSMUST00000199715 303 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm43906-201ENSMUST00000203194 906 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm18591-201ENSMUST00000220568 763 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 AC131187.2-201ENSMUST00000223936 994 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.64□□□□□ -1.67
Nup35Q8R4R6 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup35Q8R4R6 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms