Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc28aQ8CEI3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc28aQ8CEI3 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc28aQ8CEI3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm25795-201ENSMUST00000104421 132 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm15164-201ENSMUST00000122203 271 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm15970-201ENSMUST00000160623 834 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm7166-201ENSMUST00000199715 303 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm8137-201ENSMUST00000218997 463 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm9088-201ENSMUST00000220237 508 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm18591-201ENSMUST00000220568 763 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc28aQ8CEI3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.02□□□□□ -1.44
Ccdc28aQ8CEI3 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm14018-201ENSMUST00000119042 455 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm7494-201ENSMUST00000121248 441 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12732-201ENSMUST00000121688 180 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm13363-201ENSMUST00000122008 522 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm16298-201ENSMUST00000161107 420 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm27782-201ENSMUST00000185059 199 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Mir7005-201ENSMUST00000185089 69 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm43148-201ENSMUST00000198237 520 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm9278-201ENSMUST00000205508 553 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm7351-201ENSMUST00000210745 580 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ccdc28aQ8CEI3 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm13311-201ENSMUST00000117863 379 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm8317-201ENSMUST00000121261 471 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Mir1953-201ENSMUST00000157866 89 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms