Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup88Q8CEC0 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup88Q8CEC0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup88Q8CEC0 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Nup88Q8CEC0 Gm13811-201ENSMUST00000117800 256 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm14349-201ENSMUST00000137155 902 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Mir1945-201ENSMUST00000157919 78 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm23207-201ENSMUST00000158665 102 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm6541-201ENSMUST00000165542 561 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm18199-201ENSMUST00000173820 835 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm6472-201ENSMUST00000178147 651 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Mir7037-201ENSMUST00000184414 65 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm37187-201ENSMUST00000193425 341 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm45628-201ENSMUST00000210849 274 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Zfp850-201ENSMUST00000099111 941 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Nup88Q8CEC0 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm13998-201ENSMUST00000120952 335 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm37375-201ENSMUST00000193859 387 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm37385-201ENSMUST00000195223 387 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm43798-201ENSMUST00000202056 394 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm45359-201ENSMUST00000210635 427 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm46223-201ENSMUST00000215196 675 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm7802-201ENSMUST00000216464 262 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm36262-201ENSMUST00000223274 499 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nup88Q8CEC0 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm15237-201ENSMUST00000122104 469 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm25459-201ENSMUST00000157953 114 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm17044-201ENSMUST00000168549 828 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Mir7674-201ENSMUST00000184964 63 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm5886-202ENSMUST00000203957 522 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.94□□□□□ -1.3
Nup88Q8CEC0 Gm44768-201ENSMUST00000205719 393 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms