Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5321-201ENSMUST00000072050 447 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Mir298-201ENSMUST00000083476 82 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm12467-201ENSMUST00000117625 745 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Mir7685-201ENSMUST00000183555 62 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm27849-201ENSMUST00000183673 125 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm37533-201ENSMUST00000193848 545 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm19073-201ENSMUST00000219978 555 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm18601-201ENSMUST00000220831 634 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.1□□□□□ -1.27
Vps53Q8CCB4 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Vps53Q8CCB4 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm23440-201ENSMUST00000104299 130 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm8692-201ENSMUST00000118102 438 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm14805-201ENSMUST00000120172 340 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm14237-201ENSMUST00000122080 430 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm23539-201ENSMUST00000157537 224 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm23995-201ENSMUST00000158060 129 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm26923-201ENSMUST00000182615 996 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm7626-201ENSMUST00000195801 353 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm18899-201ENSMUST00000217663 546 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm24454-201ENSMUST00000083349 132 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Zfp850-201ENSMUST00000099111 941 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.09□□□□□ -1.27
Vps53Q8CCB4 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms