Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm37703-201ENSMUST00000192292 1784 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Mir669g-201ENSMUST00000116809 123 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm13162-201ENSMUST00000121481 454 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm26183-201ENSMUST00000157685 139 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm23762-201ENSMUST00000158348 106 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm23003-201ENSMUST00000179948 107 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 S100a11-ps-201ENSMUST00000181735 306 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm28843-201ENSMUST00000189198 678 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm29546-201ENSMUST00000191171 678 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm18900-201ENSMUST00000193218 584 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm24826-202ENSMUST00000197298 216 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm43624-201ENSMUST00000197368 180 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm8182-201ENSMUST00000197863 769 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm43576-201ENSMUST00000197937 871 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm2860-201ENSMUST00000199226 707 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm42883-201ENSMUST00000202594 222 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm2840-201ENSMUST00000048361 411 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm25005-201ENSMUST00000083812 156 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Gm25512-201ENSMUST00000083863 107 ntBASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.91□□□□□ -1.14
Trim47Q8C0E3 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm16082-201ENSMUST00000115992 377 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm12193-201ENSMUST00000117250 379 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm14793-201ENSMUST00000118739 311 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm12740-201ENSMUST00000118794 308 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm11617-201ENSMUST00000119609 639 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm17022-201ENSMUST00000166415 922 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms