Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx55Q6ZPL9 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm13991-201ENSMUST00000120190 648 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm22867-201ENSMUST00000157499 109 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Mir1970-201ENSMUST00000157839 104 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm20397-201ENSMUST00000174520 362 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm21399-201ENSMUST00000180210 597 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm33601-201ENSMUST00000210001 961 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 AC102287.1-201ENSMUST00000211412 454 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Mir337-201ENSMUST00000083592 97 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.03□□□□□ -1.28
Ddx55Q6ZPL9 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Ddx55Q6ZPL9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm12978-201ENSMUST00000121250 522 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm23633-201ENSMUST00000175293 119 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Mir6903-201ENSMUST00000183597 88 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm28640-201ENSMUST00000190918 550 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm29813-201ENSMUST00000195856 447 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm43478-201ENSMUST00000200381 292 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Gm10780-201ENSMUST00000099459 285 ntBASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx55Q6ZPL9 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms