Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm14998-201ENSMUST00000120502 495 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm11852-201ENSMUST00000120806 222 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm25782-201ENSMUST00000122526 289 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm25826-201ENSMUST00000157090 137 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm3242-201ENSMUST00000171273 485 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm9597-201ENSMUST00000171913 602 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Mirt2-201ENSMUST00000175179 285 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm19560-201ENSMUST00000177510 514 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Mir6952-201ENSMUST00000185092 61 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm43467-201ENSMUST00000197441 437 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm29736-201ENSMUST00000198189 385 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm44219-201ENSMUST00000203005 273 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm18413-201ENSMUST00000221573 655 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upf3bQ3ULL6 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.4
Upf3bQ3ULL6 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm13641-201ENSMUST00000117993 473 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm12494-201ENSMUST00000121684 521 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm12293-201ENSMUST00000121898 590 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm24687-201ENSMUST00000157758 241 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm3715-201ENSMUST00000172308 617 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm4845-201ENSMUST00000179202 562 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm23737-201ENSMUST00000082547 159 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Naip3-201ENSMUST00000118082 4208 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upf3bQ3ULL6 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms