Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm44117-201ENSMUST00000204442 1758 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col8a1Q00780 Gm2654-201ENSMUST00000221381 1592 ntBASIC5.84□□□□□ -1.48
Col8a1Q00780 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col8a1Q00780 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm13301-201ENSMUST00000121728 2446 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm15203-201ENSMUST00000117668 455 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm14007-201ENSMUST00000118288 210 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm6977-201ENSMUST00000121568 512 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm12438-201ENSMUST00000122034 336 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm4373-201ENSMUST00000178571 556 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm6931-201ENSMUST00000183103 371 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm27460-201ENSMUST00000184213 100 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm27299-201ENSMUST00000184593 103 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm28859-201ENSMUST00000186650 616 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm21617-201ENSMUST00000188297 691 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm37430-201ENSMUST00000193039 196 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm43392-201ENSMUST00000196560 434 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm44360-201ENSMUST00000200081 82 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm32983-201ENSMUST00000208500 505 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm8556-201ENSMUST00000210437 664 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm45514-201ENSMUST00000211531 689 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm8290-201ENSMUST00000218202 477 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm8137-201ENSMUST00000218997 463 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm26442-201ENSMUST00000082588 153 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm45807-201ENSMUST00000209142 2874 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm28583-201ENSMUST00000188903 2141 ntBASIC5.83□□□□□ -1.48
Col8a1Q00780 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms