Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm26146-201ENSMUST00000104478 185 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm23910-201ENSMUST00000104597 132 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm12115-201ENSMUST00000119969 447 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm15187-201ENSMUST00000122329 264 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm15335-201ENSMUST00000122442 411 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm27409-201ENSMUST00000184727 80 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm8367-201ENSMUST00000186145 887 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28883-201ENSMUST00000189256 369 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm43456-201ENSMUST00000202519 457 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm8290-201ENSMUST00000218202 477 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm5229-201ENSMUST00000039375 354 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms