Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Nphp4P59240 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.91□□□□□ -1.14
Nphp4P59240 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nphp4P59240 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Nphp4P59240 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nphp4P59240 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.91□□□□□ -1.14
Nphp4P59240 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nphp4P59240 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Nphp4P59240 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Nphp4P59240 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Nphp4P59240 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm44193-201ENSMUST00000204822 2523 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Gm44829-201ENSMUST00000208008 3193 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm15400-201ENSMUST00000118944 601 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm14871-201ENSMUST00000119056 194 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm13537-201ENSMUST00000120467 267 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.9□□□□□ -1.14
Nphp4P59240 Gm25824-201ENSMUST00000157092 121 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.9□□□□□ -1.14
Nphp4P59240 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Gm43743-202ENSMUST00000198353 491 ntBASIC7.9□□□□□ -1.14
Nphp4P59240 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nphp4P59240 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
Nphp4P59240 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Nphp4P59240 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Nphp4P59240 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Nphp4P59240 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
Nphp4P59240 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Nphp4P59240 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Nphp4P59240 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Nphp4P59240 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Nphp4P59240 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Nphp4P59240 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Nphp4P59240 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
Nphp4P59240 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm13579-201ENSMUST00000118519 517 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm27985-201ENSMUST00000185112 378 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm2429-201ENSMUST00000194635 586 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.89□□□□□ -1.15
Nphp4P59240 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC7.89□□□□□ -1.15
Nphp4P59240 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Nphp4P59240 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Mir218-2-201ENSMUST00000083649 110 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Nphp4P59240 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.89□□□□□ -1.15
Nphp4P59240 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Nphp4P59240 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Nphp4P59240 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.89□□□□□ -1.15
Nphp4P59240 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 AC116726.1-201ENSMUST00000215028 3497 ntBASIC7.89□□□□□ -1.15
Nphp4P59240 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Nphp4P59240 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Nphp4P59240 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm12267-201ENSMUST00000121609 761 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm23279-201ENSMUST00000157912 97 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Mir1945-201ENSMUST00000157919 78 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Gm24216-201ENSMUST00000158259 117 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm29736-201ENSMUST00000198189 385 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Gm9278-201ENSMUST00000205508 553 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC7.88□□□□□ -1.15
Nphp4P59240 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 AC125405.1-201ENSMUST00000226406 589 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Gm6104-201ENSMUST00000078030 603 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.88□□□□□ -1.15
Nphp4P59240 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nphp4P59240 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms