Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Shmt1P50431 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.59□□□□□ -1.35
Shmt1P50431 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.59□□□□□ -1.35
Shmt1P50431 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm22714-201ENSMUST00000116894 78 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm12618-201ENSMUST00000121754 483 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm26401-201ENSMUST00000158502 76 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm7281-201ENSMUST00000160010 543 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm17061-201ENSMUST00000163167 499 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm22655-201ENSMUST00000174949 96 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm29650-201ENSMUST00000188485 742 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm19596-201ENSMUST00000203685 739 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.59□□□□□ -1.35
Shmt1P50431 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.59□□□□□ -1.35
Shmt1P50431 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm22300-201ENSMUST00000082661 126 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Shmt1P50431 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.59□□□□□ -1.35
Shmt1P50431 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Shmt1P50431 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.59□□□□□ -1.36
Shmt1P50431 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.59□□□□□ -1.36
Shmt1P50431 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Shmt1P50431 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Shmt1P50431 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Shmt1P50431 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Shmt1P50431 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm14554-201ENSMUST00000119548 661 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm14712-201ENSMUST00000120195 772 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.58□□□□□ -1.36
Shmt1P50431 Gm22235-201ENSMUST00000157085 110 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm16557-201ENSMUST00000159182 191 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm16164-201ENSMUST00000160078 468 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm6541-201ENSMUST00000165542 561 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.58□□□□□ -1.36
Shmt1P50431 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm25065-201ENSMUST00000177914 132 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm25891-201ENSMUST00000180050 132 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.58□□□□□ -1.36
Shmt1P50431 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms