Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Gm29736-201ENSMUST00000198189 385 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm18255-201ENSMUST00000211316 765 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Gm5055-201ENSMUST00000215697 581 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.32□□□□□ -1.56
Rfx3P48381 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm24041-201ENSMUST00000083115 156 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx3P48381 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.32□□□□□ -1.56
Rfx3P48381 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Rfx3P48381 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Rfx3P48381 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm16007-201ENSMUST00000117837 286 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm15715-201ENSMUST00000118032 283 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx3P48381 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm26923-201ENSMUST00000182615 996 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm27348-201ENSMUST00000184511 170 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx3P48381 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm43033-201ENSMUST00000199682 425 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm3266-201ENSMUST00000217832 591 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm9292-201ENSMUST00000222008 710 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Cma2-202ENSMUST00000228263 857 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rfx3P48381 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rfx3P48381 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm25133-201ENSMUST00000082647 130 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.31□□□□□ -1.56
Rfx3P48381 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx3P48381 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx3P48381 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx3P48381 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Rfx3P48381 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.3□□□□□ -1.56
Rfx3P48381 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx3P48381 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm22953-201ENSMUST00000116724 101 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm14580-201ENSMUST00000119122 718 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm14732-201ENSMUST00000121372 545 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms