Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm18407-201ENSMUST00000192126 790 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm37774-201ENSMUST00000194401 245 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm29755-201ENSMUST00000196976 948 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm45032-201ENSMUST00000205375 520 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cxcl12P40224 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Cxcl12P40224 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.15□□□□□ -1.43
Cxcl12P40224 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cxcl12P40224 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cxcl12P40224 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cxcl12P40224 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.43
Cxcl12P40224 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cxcl12P40224 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cxcl12P40224 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm22778-201ENSMUST00000104090 128 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm22499-201ENSMUST00000104501 135 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm12488-201ENSMUST00000122449 499 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm22276-201ENSMUST00000122469 129 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm5353-201ENSMUST00000139800 793 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm24860-201ENSMUST00000158457 276 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Mir7031-201ENSMUST00000183860 65 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm4874-201ENSMUST00000203589 691 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm19786-201ENSMUST00000222589 580 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm7042-201ENSMUST00000223027 384 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Thoc7-209ENSMUST00000225325 765 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cxcl12P40224 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cxcl12P40224 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.14□□□□□ -1.43
Cxcl12P40224 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cxcl12P40224 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.13□□□□□ -1.43
Cxcl12P40224 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Grik1-209ENSMUST00000227986 2942 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.13□□□□□ -1.43
Cxcl12P40224 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm6134-201ENSMUST00000117265 171 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm15490-201ENSMUST00000119894 387 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm13259-201ENSMUST00000120792 456 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm22235-201ENSMUST00000157085 110 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm24359-201ENSMUST00000158418 221 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm4831-201ENSMUST00000174626 594 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm37838-201ENSMUST00000194464 312 ntBASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.13□□□□□ -1.43
Cxcl12P40224 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms