Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Traf1P39428 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Gm15011-201ENSMUST00000117724 1480 ntBASIC7□□□□□ -1.29
Traf1P39428 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Gm13311-201ENSMUST00000117863 379 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm15971-201ENSMUST00000119372 211 ntBASIC7□□□□□ -1.29
Traf1P39428 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm15187-201ENSMUST00000122329 264 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm14349-201ENSMUST00000137155 902 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7□□□□□ -1.29
Traf1P39428 Gm23225-201ENSMUST00000158121 114 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm24741-201ENSMUST00000158857 106 ntBASIC7□□□□□ -1.29
Traf1P39428 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7□□□□□ -1.29
Traf1P39428 Gm9597-201ENSMUST00000171913 602 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm20480-201ENSMUST00000173953 250 ntBASIC7□□□□□ -1.29
Traf1P39428 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm2058-201ENSMUST00000178791 560 ntBASIC7□□□□□ -1.29
Traf1P39428 Mir3473g-201ENSMUST00000183494 136 ntBASIC7□□□□□ -1.29
Traf1P39428 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7□□□□□ -1.29
Traf1P39428 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm42886-201ENSMUST00000199214 466 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm32158-201ENSMUST00000200135 404 ntBASIC7□□□□□ -1.29
Traf1P39428 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm4548-201ENSMUST00000208487 509 ntBASIC7□□□□□ -1.29
Traf1P39428 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7□□□□□ -1.29
Traf1P39428 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Gm18405-201ENSMUST00000220743 511 ntBASIC7□□□□□ -1.29
Traf1P39428 AC161586.1-201ENSMUST00000223232 547 ntBASIC7□□□□□ -1.29
Traf1P39428 AC113198.1-201ENSMUST00000226353 832 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Mir298-201ENSMUST00000083476 82 ntBASIC7□□□□□ -1.29
Traf1P39428 Gm25515-201ENSMUST00000083858 157 ntBASIC7□□□□□ -1.29
Traf1P39428 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC7□□□□□ -1.29
Traf1P39428 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
Traf1P39428 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Traf1P39428 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Traf1P39428 Gm43258-201ENSMUST00000200312 1950 ntBASIC7□□□□□ -1.29
Traf1P39428 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Traf1P39428 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Snora47-201ENSMUST00000157483 138 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm16164-201ENSMUST00000160078 468 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm28973-201ENSMUST00000189310 613 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm38122-201ENSMUST00000192679 885 ntBASIC6.99□□□□□ -1.29
Traf1P39428 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm4510-201ENSMUST00000218265 427 ntBASIC6.99□□□□□ -1.29
Traf1P39428 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.99□□□□□ -1.29
Traf1P39428 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm19195-201ENSMUST00000222018 511 ntBASIC6.99□□□□□ -1.29
Traf1P39428 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Thoc7-209ENSMUST00000225325 765 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Traf1P39428 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Traf1P39428 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.99□□□□□ -1.29
Traf1P39428 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.99□□□□□ -1.29
Traf1P39428 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms