Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28467-201ENSMUST00000190981 318 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Gm43148-201ENSMUST00000198237 520 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Gm45525-201ENSMUST00000210800 389 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.65□□□□□ -1.35
Col2a1P28481 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col2a1P28481 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm24230-201ENSMUST00000104313 129 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm15400-201ENSMUST00000118944 601 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm7079-201ENSMUST00000119726 171 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm7309-201ENSMUST00000121670 581 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm23279-201ENSMUST00000157912 97 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm16112-201ENSMUST00000159075 382 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Mir7028-201ENSMUST00000185016 64 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm8039-201ENSMUST00000204758 712 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm4374-201ENSMUST00000204929 424 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm46192-201ENSMUST00000217894 326 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.64□□□□□ -1.35
Col2a1P28481 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col2a1P28481 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col2a1P28481 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col2a1P28481 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Col2a1P28481 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col2a1P28481 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.63□□□□□ -1.35
Col2a1P28481 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Col2a1P28481 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col2a1P28481 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Col2a1P28481 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col2a1P28481 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm43724-201ENSMUST00000197516 226 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Gm42776-201ENSMUST00000198031 406 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm15500-201ENSMUST00000071523 894 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Gm7676-201ENSMUST00000084055 319 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.63□□□□□ -1.35
Col2a1P28481 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col2a1P28481 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms