Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm40692-201ENSMUST00000220411 491 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Col1a1P11087 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm23459-201ENSMUST00000083259 131 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col1a1P11087 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col1a1P11087 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.87□□□□□ -1.31
Col1a1P11087 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm13681-201ENSMUST00000117925 210 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm12317-201ENSMUST00000122307 319 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm24860-201ENSMUST00000158457 276 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.87□□□□□ -1.31
Col1a1P11087 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Gm29755-201ENSMUST00000196976 948 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Thoc7-209ENSMUST00000225325 765 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm25187-201ENSMUST00000083906 133 ntBASIC6.87□□□□□ -1.31
Col1a1P11087 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col1a1P11087 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col1a1P11087 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col1a1P11087 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm24265-201ENSMUST00000101833 141 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm11990-201ENSMUST00000121505 897 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm22122-201ENSMUST00000175147 200 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm24407-201ENSMUST00000177864 141 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Zfp429-203ENSMUST00000224684 524 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col1a1P11087 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col1a1P11087 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.86□□□□□ -1.31
Col1a1P11087 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col1a1P11087 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms