Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Mir449c-201ENSMUST00000102192 109 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm14998-201ENSMUST00000120502 495 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm7832-201ENSMUST00000202613 880 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm6009-201ENSMUST00000210848 280 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Olfr467-201ENSMUST00000084756 927 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.38□□□□□ -1.39
Chmp6P0C0A3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm13593-201ENSMUST00000121329 692 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm44316-201ENSMUST00000199274 97 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm5886-202ENSMUST00000203957 522 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm24200-201ENSMUST00000082955 157 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp6P0C0A3 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm20486-201ENSMUST00000101544 128 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Mir700-201ENSMUST00000102169 79 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm14712-201ENSMUST00000120195 772 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Gm13531-201ENSMUST00000121893 543 ntBASIC6.36□□□□□ -1.39
Chmp6P0C0A3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Chmp6P0C0A3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms