Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm11105-201ENSMUST00000112781 478 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm11821-201ENSMUST00000117335 979 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm12293-201ENSMUST00000121898 590 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm14237-201ENSMUST00000122080 430 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm22214-201ENSMUST00000157563 172 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm21772-201ENSMUST00000169213 478 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm17126-201ENSMUST00000172276 523 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm24103-201ENSMUST00000174930 77 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Mir5125-201ENSMUST00000175240 79 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm7745-201ENSMUST00000182235 973 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm6693-201ENSMUST00000189583 813 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm42961-201ENSMUST00000202023 181 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm45082-201ENSMUST00000206082 601 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm18940-201ENSMUST00000222518 871 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.67□□□□□ -1.5
Upk3aQ9JKX8 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm11617-201ENSMUST00000119609 639 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm22867-201ENSMUST00000157499 109 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm23207-201ENSMUST00000158665 102 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm28149-201ENSMUST00000187102 378 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm28768-201ENSMUST00000189034 378 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm7166-201ENSMUST00000199715 303 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm5830-201ENSMUST00000049117 443 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms