Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Snord116l8-201ENSMUST00000179889 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Snord116l7-201ENSMUST00000179895 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Snord116l5-201ENSMUST00000179927 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Snord116l6-201ENSMUST00000179955 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm26188-201ENSMUST00000179963 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm25471-201ENSMUST00000180126 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm26269-201ENSMUST00000180144 126 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm26433-201ENSMUST00000180227 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Snord116l11-201ENSMUST00000180312 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm23862-201ENSMUST00000180342 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm22128-201ENSMUST00000180346 94 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm4891-201ENSMUST00000182279 912 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm26977-201ENSMUST00000183151 996 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm20561-201ENSMUST00000188131 292 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm8870-201ENSMUST00000188170 775 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm29126-201ENSMUST00000188686 151 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm28952-201ENSMUST00000189285 681 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm29168-201ENSMUST00000189953 687 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm44718-201ENSMUST00000206886 359 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm8168-201ENSMUST00000209631 948 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm45739-201ENSMUST00000213094 388 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 AC091260.1-201ENSMUST00000216112 229 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm18774-201ENSMUST00000218269 601 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 CT485612.3-201ENSMUST00000222179 408 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm18629-201ENSMUST00000222496 884 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 AC158521.1-201ENSMUST00000225295 660 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm9800-201ENSMUST00000052615 336 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm9761-201ENSMUST00000075650 492 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm25404-201ENSMUST00000082970 107 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim42Q9D2H5 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm22150-201ENSMUST00000104447 135 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Mir190b-201ENSMUST00000104803 80 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Mir669i-201ENSMUST00000117007 127 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm11969-201ENSMUST00000118848 356 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm5319-201ENSMUST00000118965 873 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm2199-201ENSMUST00000119065 874 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm11198-201ENSMUST00000119771 974 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm14331-201ENSMUST00000120396 409 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm14796-201ENSMUST00000121216 959 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm12578-201ENSMUST00000121244 417 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm12181-201ENSMUST00000121448 531 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm16412-201ENSMUST00000121602 273 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm24517-201ENSMUST00000122560 107 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Mir1903-201ENSMUST00000122574 80 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm23220-201ENSMUST00000158115 137 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm22949-201ENSMUST00000158562 105 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm10177-202ENSMUST00000161698 207 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm25692-201ENSMUST00000175444 125 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm7436-201ENSMUST00000187229 391 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm43542-201ENSMUST00000199505 379 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm44449-201ENSMUST00000203610 153 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm7565-201ENSMUST00000203611 623 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm44773-201ENSMUST00000207374 557 ntBASIC7.11□□□□□ -1.27
Trim42Q9D2H5 Gm44566-201ENSMUST00000207638 304 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms