Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx56Q9D0R4 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm22103-201ENSMUST00000116733 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm26475-201ENSMUST00000116769 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm23620-201ENSMUST00000116812 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm25042-201ENSMUST00000116856 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm25540-201ENSMUST00000116880 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm14356-201ENSMUST00000118322 869 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm12040-201ENSMUST00000118357 537 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm6067-201ENSMUST00000121648 491 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm26486-201ENSMUST00000158021 110 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm26352-201ENSMUST00000158223 125 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm23069-201ENSMUST00000158240 311 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm23550-201ENSMUST00000179003 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm25123-201ENSMUST00000179154 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm25353-201ENSMUST00000179366 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm22992-201ENSMUST00000179496 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm25892-201ENSMUST00000179867 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm24092-201ENSMUST00000180257 121 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm27853-201ENSMUST00000184176 250 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm37511-201ENSMUST00000192901 294 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm38291-201ENSMUST00000193671 259 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm44856-201ENSMUST00000206639 304 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm10688-201ENSMUST00000214985 520 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 AC159476.2-201ENSMUST00000216221 418 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm9293-201ENSMUST00000223096 306 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx56Q9D0R4 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm20541-201ENSMUST00000173035 1406 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm22267-201ENSMUST00000104008 131 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm15016-201ENSMUST00000117300 720 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 H3f3c-201ENSMUST00000119459 411 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm14383-201ENSMUST00000121637 386 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm13676-201ENSMUST00000122185 591 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm11962-201ENSMUST00000145746 255 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Mir1264-201ENSMUST00000175381 86 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm38214-201ENSMUST00000192581 988 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm37993-201ENSMUST00000195301 988 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm44225-201ENSMUST00000203582 186 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm21112-201ENSMUST00000212224 578 ntBASIC6.7□□□□□ -1.34
Ddx56Q9D0R4 Gm7760-201ENSMUST00000212265 578 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms