Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm18592-201ENSMUST00000221529 276 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Cma2-202ENSMUST00000228263 857 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rpa3Q9CQ71 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm14115-201ENSMUST00000119242 482 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm15840-201ENSMUST00000122099 943 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm25782-201ENSMUST00000122526 289 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm26106-201ENSMUST00000157254 228 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm44219-201ENSMUST00000203005 273 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm45850-201ENSMUST00000212536 338 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm23502-201ENSMUST00000083902 145 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Rpa3Q9CQ71 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm24709-201ENSMUST00000104123 132 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm13641-201ENSMUST00000117993 473 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm25826-201ENSMUST00000157090 137 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm27158-201ENSMUST00000183813 238 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm27193-201ENSMUST00000184217 586 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm6074-201ENSMUST00000193340 451 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm6702-201ENSMUST00000208496 471 ntBASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Rpa3Q9CQ71 Gm18940-201ENSMUST00000222518 871 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms