Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdh23Q99PF4 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdh23Q99PF4 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm6175-201ENSMUST00000121351 400 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Mir7222-201ENSMUST00000183740 75 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Nsa2-203ENSMUST00000225410 974 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm22493-201ENSMUST00000104494 132 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm23534-201ENSMUST00000157539 97 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Mir7012-201ENSMUST00000183900 64 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm45525-201ENSMUST00000210800 389 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdh23Q99PF4 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.71□□□□□ -1.49
Cdh23Q99PF4 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.71□□□□□ -1.49
Cdh23Q99PF4 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cdh23Q99PF4 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cdh23Q99PF4 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm23692-201ENSMUST00000101881 160 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm24578-201ENSMUST00000103970 129 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm24444-201ENSMUST00000157244 308 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm24188-201ENSMUST00000157980 108 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gm43488-201ENSMUST00000198874 2504 ntBASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdh23Q99PF4 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdh23Q99PF4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms