Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.29□□□□□ -1.56
Scrt1Q99M85 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scrt1Q99M85 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.29□□□□□ -1.56
Scrt1Q99M85 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scrt1Q99M85 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.29□□□□□ -1.56
Scrt1Q99M85 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scrt1Q99M85 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.29□□□□□ -1.56
Scrt1Q99M85 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Scrt1Q99M85 Gm42837-201ENSMUST00000197071 2829 ntBASIC5.29□□□□□ -1.56
Scrt1Q99M85 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm13998-201ENSMUST00000120952 335 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm13007-201ENSMUST00000121866 365 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm11545-201ENSMUST00000146507 375 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm22636-201ENSMUST00000158142 275 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm16269-201ENSMUST00000160532 409 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm3715-201ENSMUST00000172308 617 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Mir5125-201ENSMUST00000175240 79 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm28847-201ENSMUST00000186778 700 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm44382-201ENSMUST00000198683 122 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm19900-201ENSMUST00000207285 576 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm10095-201ENSMUST00000222765 483 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm7808-201ENSMUST00000082002 387 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Mir188-201ENSMUST00000083464 68 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Mir375-201ENSMUST00000083682 64 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.28□□□□□ -1.56
Scrt1Q99M85 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scrt1Q99M85 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm22592-201ENSMUST00000104242 131 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm24886-201ENSMUST00000104384 123 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm14098-201ENSMUST00000119295 623 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm14900-201ENSMUST00000120304 733 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm14601-201ENSMUST00000120892 236 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm23149-201ENSMUST00000158837 230 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Mir7028-201ENSMUST00000185016 64 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm37319-201ENSMUST00000193500 636 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm18325-201ENSMUST00000203228 835 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scrt1Q99M85 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Gm3785-201ENSMUST00000221000 202 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.27□□□□□ -1.57
Scrt1Q99M85 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Scrt1Q99M85 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms