Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm23617-201ENSMUST00000175410 95 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm27985-201ENSMUST00000185112 378 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm3148-201ENSMUST00000203594 612 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm19900-201ENSMUST00000207285 576 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.06□□□□□ -1.44
Cstf1Q99LC2 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm2199-201ENSMUST00000119065 874 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm14267-201ENSMUST00000119751 496 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm12494-201ENSMUST00000121684 521 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm22106-201ENSMUST00000122544 127 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Mir1903-201ENSMUST00000122574 80 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm27887-201ENSMUST00000184367 102 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm8454-201ENSMUST00000196980 811 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm5306-201ENSMUST00000203325 757 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm7825-201ENSMUST00000204046 416 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm6068-201ENSMUST00000222270 387 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm28392-201ENSMUST00000077630 393 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm24041-201ENSMUST00000083115 156 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Robo2-210ENSMUST00000226478 8059 ntBASIC6.05□□□□□ -1.44
Cstf1Q99LC2 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf1Q99LC2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.04□□□□□ -1.44
Cstf1Q99LC2 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cstf1Q99LC2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms