Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm13768-201ENSMUST00000116469 929 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm14769-201ENSMUST00000118590 432 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm14842-201ENSMUST00000119577 269 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm12322-201ENSMUST00000121605 389 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm11962-201ENSMUST00000145746 255 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm24103-201ENSMUST00000174930 77 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm29489-201ENSMUST00000188934 324 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm8930-201ENSMUST00000201693 768 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm45405-201ENSMUST00000211544 609 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm9292-201ENSMUST00000222008 710 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm23624-201ENSMUST00000082463 321 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Mir7b-201ENSMUST00000083557 111 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.68□□□□□ -1.5
Lsm1Q8VC85 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lsm1Q8VC85 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm22284-201ENSMUST00000104132 132 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm13183-201ENSMUST00000118615 789 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm12438-201ENSMUST00000122034 336 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm23757-201ENSMUST00000158353 100 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm21999-201ENSMUST00000165985 387 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm23631-201ENSMUST00000175291 123 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm29124-201ENSMUST00000186576 452 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm28918-201ENSMUST00000188822 699 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm31211-201ENSMUST00000199170 253 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm7181-201ENSMUST00000202197 434 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm18839-201ENSMUST00000204292 670 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm24032-201ENSMUST00000083932 159 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Lsm1Q8VC85 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms