Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm12653-201ENSMUST00000117778 561 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm13998-201ENSMUST00000120952 335 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm12140-201ENSMUST00000121214 544 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm12396-201ENSMUST00000121600 306 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Mir1945-201ENSMUST00000157919 78 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm28080-201ENSMUST00000188552 722 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm21524-201ENSMUST00000190499 696 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm21715-201ENSMUST00000191056 694 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm42776-201ENSMUST00000198031 406 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm43743-202ENSMUST00000198353 491 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm42824-201ENSMUST00000199361 247 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm44053-201ENSMUST00000203364 929 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm7570-201ENSMUST00000215246 698 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm8412-201ENSMUST00000077493 440 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps39Q8R5L3 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm25795-201ENSMUST00000104421 132 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm8722-201ENSMUST00000121466 769 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm24767-201ENSMUST00000158509 95 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm21999-201ENSMUST00000165985 387 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm20453-201ENSMUST00000173968 226 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm37341-201ENSMUST00000194680 371 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm37196-201ENSMUST00000194762 906 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm5050-201ENSMUST00000197164 775 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm44809-201ENSMUST00000208305 993 ntBASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps39Q8R5L3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms