Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 AC153144.1-201ENSMUST00000221759 3139 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm26067-201ENSMUST00000103789 110 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm13430-201ENSMUST00000121366 288 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Mir3097-201ENSMUST00000175356 67 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Mir7008-201ENSMUST00000184398 63 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm37966-201ENSMUST00000193122 326 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm17824-201ENSMUST00000197690 805 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm5027-201ENSMUST00000206700 375 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm18043-201ENSMUST00000216741 739 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm9472-201ENSMUST00000221625 526 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Vps53Q8CCB4 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm26146-201ENSMUST00000104478 185 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm5401-201ENSMUST00000122444 365 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Snora47-201ENSMUST00000157483 138 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm8282-201ENSMUST00000187559 483 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm29072-201ENSMUST00000191149 678 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm8860-201ENSMUST00000193160 445 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm43945-201ENSMUST00000203595 754 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.11□□□□□ -1.27
Vps53Q8CCB4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 AC154616.2-201ENSMUST00000227978 398 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Gm8256-203ENSMUST00000228692 591 ntBASIC7.11□□□□□ -1.27
Vps53Q8CCB4 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms