Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm18689-201ENSMUST00000203969 902 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm8412-201ENSMUST00000077493 440 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Mir133b-201ENSMUST00000083546 119 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm7670-201ENSMUST00000121272 641 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Mir7056-201ENSMUST00000183776 59 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm28976-201ENSMUST00000188070 144 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm29650-201ENSMUST00000188485 742 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm2011-203ENSMUST00000203750 435 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm22867-201ENSMUST00000157499 109 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Gm43779-201ENSMUST00000196691 829 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a6Q8C6K9 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm12287-201ENSMUST00000119770 707 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm22993-201ENSMUST00000175423 254 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm38670-201ENSMUST00000199248 77 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a6Q8C6K9 Gm25537-201ENSMUST00000103851 109 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms