Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm23754-201ENSMUST00000157576 63 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm26652-202ENSMUST00000181672 475 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm6931-201ENSMUST00000183103 371 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm27218-201ENSMUST00000183745 392 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm27236-201ENSMUST00000184147 442 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm28211-201ENSMUST00000190920 315 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm38261-201ENSMUST00000192608 316 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm19035-202ENSMUST00000194575 959 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm20128-201ENSMUST00000196189 417 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm44091-201ENSMUST00000205212 649 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm45189-201ENSMUST00000208567 363 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm23452-201ENSMUST00000083327 107 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm23846-201ENSMUST00000083835 107 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm44675-201ENSMUST00000208188 2927 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Prpf38bQ80SY5 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm11445-201ENSMUST00000119101 532 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm7189-201ENSMUST00000119811 429 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm13991-201ENSMUST00000120190 648 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Mir1930-201ENSMUST00000158799 84 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm3076-201ENSMUST00000161613 451 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm7152-201ENSMUST00000163570 605 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm19840-201ENSMUST00000169624 882 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm4152-201ENSMUST00000172675 259 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Mir7j-201ENSMUST00000184427 122 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm27653-201ENSMUST00000185037 136 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm5853-201ENSMUST00000197183 632 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm43850-201ENSMUST00000202021 578 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC7.42□□□□□ -1.22
Prpf38bQ80SY5 Gm45626-201ENSMUST00000210093 361 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 2725.9 ms