Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm42983-201ENSMUST00000199879 815 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm42581-201ENSMUST00000201774 966 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm44053-201ENSMUST00000203364 929 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.68□□□□□ -1.34
Usp49Q6P9L4 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm13770-201ENSMUST00000117149 305 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm13593-201ENSMUST00000121329 692 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm13531-201ENSMUST00000121893 543 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm26346-201ENSMUST00000157525 329 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm24179-201ENSMUST00000158925 127 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm3076-201ENSMUST00000161613 451 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm6055-201ENSMUST00000180532 378 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Mir6992-201ENSMUST00000183342 109 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Mir7235-201ENSMUST00000183796 56 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm5066-201ENSMUST00000188479 822 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm37463-201ENSMUST00000193819 796 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm44849-201ENSMUST00000207595 484 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm7570-201ENSMUST00000215246 698 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm10221-201ENSMUST00000088299 309 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Usp49Q6P9L4 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm25795-201ENSMUST00000104421 132 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm26143-201ENSMUST00000104480 108 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm15421-202ENSMUST00000118224 399 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm14783-201ENSMUST00000118900 663 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm14712-201ENSMUST00000120195 772 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm14998-201ENSMUST00000120502 495 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Olfr331-202ENSMUST00000170501 957 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm15257-201ENSMUST00000177680 883 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm15252-201ENSMUST00000177750 883 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm15256-201ENSMUST00000177793 883 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm22254-201ENSMUST00000179186 110 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm15260-201ENSMUST00000179402 883 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm21399-201ENSMUST00000180210 597 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm28066-201ENSMUST00000188657 472 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm18183-201ENSMUST00000191024 615 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm43382-201ENSMUST00000198954 838 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm43501-201ENSMUST00000202513 107 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm44809-201ENSMUST00000208305 993 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 Gm18329-201ENSMUST00000215832 589 ntBASIC6.66□□□□□ -1.34
Usp49Q6P9L4 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.66□□□□□ -1.34
Usp49Q6P9L4 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms