Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm45887-201ENSMUST00000212672 2998 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm28906-201ENSMUST00000191371 1779 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm25969-201ENSMUST00000157166 132 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm18006-201ENSMUST00000177411 662 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm18291-201ENSMUST00000190791 301 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm43555-201ENSMUST00000196588 310 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm6828-201ENSMUST00000207902 1186 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 CT009556.1-201ENSMUST00000227282 449 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Mir134-201ENSMUST00000083492 71 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm17841-201ENSMUST00000210711 2425 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Gm20749-201ENSMUST00000186319 3492 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 AC154141.1-201ENSMUST00000208403 4136 ntBASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim41Q5NCC3 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm22091-201ENSMUST00000116908 127 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm14000-201ENSMUST00000118670 233 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm11913-201ENSMUST00000119094 336 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm42652-201ENSMUST00000199073 614 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 AC158803.2-201ENSMUST00000219452 679 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm6056-201ENSMUST00000221253 488 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 AC154767.2-201ENSMUST00000224584 414 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 CT009711.2-201ENSMUST00000225352 934 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 AC154324.1-201ENSMUST00000226711 814 ntBASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim41Q5NCC3 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm16204-201ENSMUST00000117864 1897 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 CT573019.1-201ENSMUST00000227762 1689 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm18359-201ENSMUST00000173024 1459 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm22267-201ENSMUST00000104008 131 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm12565-201ENSMUST00000119004 649 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm14251-201ENSMUST00000122133 279 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm9359-201ENSMUST00000163721 1221 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm4613-201ENSMUST00000165488 276 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Mir5617-201ENSMUST00000176786 57 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm24417-201ENSMUST00000178123 79 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm24653-201ENSMUST00000178541 79 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm25934-201ENSMUST00000178642 79 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm28527-201ENSMUST00000185210 297 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm18469-201ENSMUST00000208850 439 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm2221-201ENSMUST00000209342 418 ntBASIC12.42□□□□□ -0.42
Trim41Q5NCC3 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms