Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.31□□□□□ -1.4
Upf3bQ3ULL6 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm14783-201ENSMUST00000118900 663 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm26106-201ENSMUST00000157254 228 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm22599-201ENSMUST00000157597 132 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm15970-201ENSMUST00000160623 834 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm27653-201ENSMUST00000185037 136 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upf3bQ3ULL6 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm14115-201ENSMUST00000119242 482 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Vis1-201ENSMUST00000183957 201 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm43946-201ENSMUST00000204058 886 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm6702-201ENSMUST00000208496 471 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm23502-201ENSMUST00000083902 145 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Gm24029-201ENSMUST00000083928 143 ntBASIC6.29□□□□□ -1.4
Upf3bQ3ULL6 Olfr467-201ENSMUST00000084756 927 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 1624.7 ms