Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm25422-201ENSMUST00000104219 129 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm14631-201ENSMUST00000119067 594 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm13815-201ENSMUST00000119963 412 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm11575-201ENSMUST00000122243 228 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm12368-201ENSMUST00000122251 434 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm14903-201ENSMUST00000122435 537 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm15843-201ENSMUST00000146593 529 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm9167-201ENSMUST00000182469 962 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC6.49□□□□□ -1.37
Msx2Q03358 Mir8120-201ENSMUST00000185035 139 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm18296-201ENSMUST00000192475 783 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm37550-201ENSMUST00000193230 463 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm29950-201ENSMUST00000195273 237 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm5948-201ENSMUST00000219627 839 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msx2Q03358 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.49□□□□□ -1.37
Msx2Q03358 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.49□□□□□ -1.37
Msx2Q03358 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msx2Q03358 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Msx2Q03358 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Msx2Q03358 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Msx2Q03358 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm22152-201ENSMUST00000116966 125 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm8534-201ENSMUST00000118553 766 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm12433-201ENSMUST00000119659 255 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm6977-201ENSMUST00000121568 512 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm13237-201ENSMUST00000122151 635 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm26023-201ENSMUST00000122722 313 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm15534-201ENSMUST00000137642 562 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.48□□□□□ -1.37
Msx2Q03358 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Gm25219-201ENSMUST00000157545 330 ntBASIC6.48□□□□□ -1.37
Msx2Q03358 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msx2Q03358 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Msx2Q03358 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms