Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm12077-201ENSMUST00000117049 364 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm15715-201ENSMUST00000118032 283 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm14842-201ENSMUST00000119577 269 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm13740-201ENSMUST00000120590 310 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm25152-201ENSMUST00000157117 114 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm38291-201ENSMUST00000193671 259 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm37196-201ENSMUST00000194762 906 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm37235-201ENSMUST00000195171 59 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm9480-201ENSMUST00000198038 616 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm19900-201ENSMUST00000207285 576 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm5321-201ENSMUST00000072050 447 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm11984-201ENSMUST00000118142 766 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm26106-201ENSMUST00000157254 228 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm23280-201ENSMUST00000157905 139 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm24359-201ENSMUST00000158418 221 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm21399-201ENSMUST00000180210 597 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm16531-201ENSMUST00000180658 967 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm44316-201ENSMUST00000199274 97 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm19060-201ENSMUST00000201959 421 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm5886-202ENSMUST00000203957 522 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm4548-201ENSMUST00000208487 509 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Gm6068-201ENSMUST00000222270 387 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx3-1P97436 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.18□□□□□ -1.58
Nkx3-1P97436 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms