Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.53□□□□□ -1.36
CiitaP79621 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.53□□□□□ -1.36
CiitaP79621 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CiitaP79621 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
CiitaP79621 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Gm8501-201ENSMUST00000117684 432 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm14925-201ENSMUST00000120611 438 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm15801-201ENSMUST00000120920 522 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm23408-201ENSMUST00000158523 265 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm8783-201ENSMUST00000159764 522 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm23162-201ENSMUST00000175081 121 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm27024-201ENSMUST00000182561 755 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm18444-201ENSMUST00000191239 629 ntBASIC6.52□□□□□ -1.37
CiitaP79621 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm43655-201ENSMUST00000197367 222 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm44316-201ENSMUST00000199274 97 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm44243-201ENSMUST00000204323 692 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm4548-201ENSMUST00000208487 509 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm6009-201ENSMUST00000210848 280 ntBASIC6.52□□□□□ -1.37
CiitaP79621 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.52□□□□□ -1.37
CiitaP79621 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm5582-201ENSMUST00000075251 522 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Gm23502-201ENSMUST00000083902 145 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.52□□□□□ -1.37
CiitaP79621 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CiitaP79621 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
CiitaP79621 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms